Staphylococcus aureus RF122

The prediction was done using a set of srn genes identified from SRD curated sRNAs.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_1090_Teg19as98.102476470440650443125124760.0 4313
srn_4470_RsaX2899.6611774023886032389779111770.0 2152
srn_1670_Teg20as99.11100981680759681766110090.0 1812
srn_0770_Teg18as99.198657030639730726118650.0 1559
srn_1580_sbrC99.11675606452016458751207940.0 1214
srn_1580_sbrC98.402504064581864606787011195e-122 440
srn_5020_sRNA40199.65568202649908265047515680.0 1038
srn_3910_RNAIII99.42517122044876204539115160.0 937
srn_1590_rsaC99.415053064537164587515050.0 917
srn_1470_sRNA12986.7583887757558657642318140.0 911
srn_2170_sRNA18799.394903095406595455414900.0 889
srn_1480_sRNA13090.8961550257958658020016090.0 821
srn_1480_sRNA13090.5761552257559957621316090.0 809
srn_1480_sRNA13087.84255310264685226471065352811e-79 300
srn_1480_sRNA13083.46266440264719226474576093444e-64 248
srn_1660_sRNA14099.124524067833367878414520.0 813
srn_0550_Sau645498.454517021713121758114510.0 795
srn_2130_rsaE97.8045410094208194253464590.0 784
RNAseP98.85436411436731143716614350.0 776
srn_0860_RsaOB99.764211036172536214514210.0 773
srn_4330_Teg36as95.93467412302681230314714520.0 743
srn_2350_rsaOP98.56418601058014105843114180.0 739
srn_4770_sRNA38596.114371212538981253941714320.0 708
srn_1820_sRNA15497.93387717560617564472095940.0 669
srn_1820_sRNA15495.981746175591075608211743e-74 281
srn_2880_RsaOQ99.18366301337771133813613660.0 660
srn_5070_RsaX2597.63379902696249269662713790.0 651
srn_0370_sRNA2299.433512013040013075013510.0 638
tmRNA98.613595081172481208213590.0 636
srn_3300_Teg7099.43349111644190164453813488e-180 632
srn_0690_sRNA4499.713451025009725044113458e-180 632
tmRNA98.053597081172481208213591e-177 625
srn_4050_artR98.84346402150823215116813462e-175 617
srn_1340_sRNA11998.833424053755153789213424e-173 610
srn_3690_rsaOW695.443731701919891192026313731e-168 595
srn_3520_sRNA27998.50333501777610177794213332e-166 588
srn_2480_sRNA20599.38321201108551110887113218e-165 582
srn_1930_rsaOF99.373192080506580538313191e-163 579
srn_3470_sRNA27495.103671511748471174883413671e-162 575
srn_3510_Teg74100.00301001775121177542113015e-157 556
srn_2250_sprG493.7736923097324097360813692e-156 555
srn_2250_sprG495.80119509731219732392513692e-47 193
srn_1990_Teg40as100.003000082877282907113002e-156 555
srn_0410_sRNA2598.413155014880014911413152e-156 555
srn_4950_sRNA39797.81320702619251261957013207e-156 553
srn_4340_Teg2399.02307302303525230383113072e-155 551
srn_0090_sRNA596.39332120318073213823333e-154 547
srn_4830_Sau6072100.00295002552761255305512951e-153 545
srn_2560_sRNA21297.49319711144865114518313184e-153 544
srn_4800_rsaOU99.33300112548375254867313001e-152 542
srn_0670_Sau699498.683044024672324702613045e-152 540
srn_1430_sRNA12699.322952054879354908712952e-150 534
srn_0280_sRNA1698.6629940657116600912993e-149 531
srn_1350_Teg4599.312912053871153900112914e-148 527
srn_1980_sRNA16998.972913082827082856012912e-146 521
srn_4940_sRNA39696.773101002615738261604713102e-145 518
srn_3320_sRNA26499.65283101661332166161412832e-145 518
srn_1890_sRNA16198.312955078957078986412952e-145 518
srn_0810_sRNA5698.612884032593132621812884e-143 510
srn_0100_sRNA697.6429670340983439312961e-142 508
srn_2530_sRNA20996.71304821118888111919023042e-141 505
srn_0720_sRNA4799.632731026879726906912739e-140 499
srn_0650_sRNA4299.632721024278624305712723e-139 497
srn_3360_sRNA26798.24284321688124168840612831e-138 496
srn_1610_sRNA13698.232825065519165547212824e-138 494
srn_3260_Teg6998.90273301618509161878112732e-136 488
srn_2090_sRNA18099.262702088968588995412702e-136 488
srn_1530_sRNA13398.902723062083162110212727e-136 486
srn_9090_sRNA6998.892713040189340216312712e-135 484
srn_2390_sRNA20097.86280601064609106488812802e-135 484
srn_0390_sRNA2498.892713014597214624212712e-135 484
srn_1860_sRNA15899.252652077501577527912651e-133 479
srn_2430_sRNA20299.24264201080150108041312644e-133 477
srn_4190_sRNA34299.61259102212302221256012595e-132 473
srn_5060_sRNA40595.852891202685245268553312892e-130 468
srn_5060_sRNA40589.295660268598326860382232788e-1171.3
srn_3280_sRNA26099.23259201637924163818212592e-130 468
4.5S100.002530046843146868312532e-130 468
srn_4600_sRNA37696.452821002466344246662512829e-130 466
srn_4580_sRNA37498.48264402459788246005112649e-130 466
srn_4520_RsaX2098.47262402426106242636712621e-128 462
srn_2180_sRNA188100.002500095614795639612501e-128 462
srn_0420_sRNA2699.602531015159815185012531e-128 462
srn_2980_sRNA23899.22255201392371139262512554e-128 460
srn_1850_sRNA15799.602521076778876803912524e-128 460
srn_0300_sRNA1898.4726140793897964912614e-128 460
srn_3680_sRNA29099.60249101915992191624012492e-126 455
srn_3530_sRNA28197.39268521783144178341112662e-126 455
srn_4370_sRNA35592.263231952317258231757733227e-126 453
srn_3100_sRNA24699.60247101485805148605112472e-125 451
srn_2850_Teg11298.81253301324398132465012532e-125 451
srn_4360_sRNA35499.59246102313350231359512469e-125 449
srn_2420_sRNA20197.00267801076269107653542709e-125 449
srn_1390_sRNA12399.592441054361054385312441e-123 446
srn_0730_sRNA4898.052565027211727237212561e-123 446
srn_4790_sRNA38798.802502125426512542899563054e-123 444
srn_4790_sRNA38797.674310254262125426631436e-1275.0
srn_4730_sRNA38394.702831502511166251144812835e-122 440
srn_3500_sRNA27799.18244201769017176926012445e-122 440
srn_3350_sRNA26698.78246301676328167657312462e-121 438
srn_3270_sRNA25999.58240101637083163732212402e-121 438
srn_2970_sRNA23599.58240101383221138346012402e-121 438
srn_4000_sRNA32697.63253602137443213769512533e-120 435
srn_0360_Teg17as98.762423012548412572512423e-119 431
srn_0070_sRNA499.1523520252102544412355e-117 424
srn_4490_sRNA365100.00226002407529240775412263e-115 418
srn_1650_sRNA13995.7525911066845766871512593e-115 418
srn_2140_sRNA18498.312364094345594369012363e-114 414
srn_3650_sRNA28999.56226101907703190792812261e-113 412
srn_3400_sRNA26997.90238501724785172502212381e-113 412
srn_3730_sRNA29799.56225101979725197994912254e-113 411
srn_2440_Teg5699.56225101082793108301712254e-113 411
srn_0710_sRNA4699.562251026466626489012254e-113 411
srn_4980_Teg3299.55224102638076263829912242e-112 409
srn_2450_Sau622997.49239601095812109605012392e-112 409
srn_4900_sRNA39496.71243802598929259917112432e-111 405
srn_2570_sRNA21398.68228301154187115441412282e-111 405
srn_4550_sprA297.85233502443940244417212337e-111 403
srn_4550_sprA295.837230243982424398951721e-24 117
srn_1490_Sau6477100.002160059089859111312169e-110 399
srn_3160_RsaOD100.00215001555322155553612153e-109 398
srn_2790_sRNA22499.54217101289019128923512171e-108 396
srn_2650_sRNA21898.65223301230512123073412231e-108 396
srn_1270_Teg4498.242273150737750760312261e-108 396
srn_0930_Teg7698.652233038352638374812231e-108 396
srn_2230_sprG296.272418197298497322312414e-108 394
srn_0440_rsaK100.002120016181816202912122e-107 392
srn_3490_RsaOE98.64221211765402176562212206e-107 390
6S100.00211001615052161526282186e-107 390
srn_2750_sRNA223100.00210001283261128347012102e-106 388
srn_0030_Teg3598.2122331124891271012232e-106 388
srn_3930_sRNA31997.35226602054092205431712263e-105 385
srn_3240_sRNA25599.07214201614323161453612143e-105 385
srn_3660_Sau651599.06213201909255190946712139e-105 383
srn_3640_sRNA288100.00207001904434190464012079e-105 383
srn_2050_sRNA17799.052112085838985859912111e-103 379
srn_4200_sRNA34398.59213302224657222486912134e-103 377
srn_3950_Teg1697.33225112063549206376812254e-103 377
srn_1810_Teg5199.512061074749674770112062e-102 375
srn_1830_sRNA155100.002020076384076404122036e-102 374
srn_0530_sRNA3398.582113020153720174712116e-102 374
srn_0050_Teg196.0722990157901601812296e-102 374
srn_1210_sRNA10699.022052049046949067312053e-100 368
srn_0320_Sau1699.0220420983669856912049e-100 366
srn_0320_Sau16100.00510099870999201812315e-1895.3
srn_1690_sRNA14398.542063068780068800512063e-99 364
srn_4430_sRNA360100.00196002339077233927211961e-98 363
srn_0260_Teg15as93.44244160530915333412441e-98 363
srn_2270_sRNA19296.362207197391797413512204e-98 361
srn_4810_sRNA38898.99199202549776254997442026e-97 357
srn_3200_sRNA25399.49196101605640160583511966e-97 357
srn_2380_sRNA199100.00193001061360106155211936e-97 357
srn_1940_sRNA16595.1322611080856680879112266e-97 357
srn_0990_sRNA8795.582265341570041592412226e-97 357
srn_0010_sRNA41298.991992031451211996e-97 357
srn_3190_Teg6899.49195101604099160429311952e-96 355
srn_0570_sRNA3599.491951022198422217811952e-96 355
srn_0270_Teg16as97.5820750578565806212072e-96 355
srn_9570_sRNA30596.73214421418257141846821317e-96 353
srn_5010_Teg3398.98196202644782264497711963e-95 351
srn_4620_sRNA37893.972321402485235248546612323e-95 351
srn_4010_sRNA32798.49199302143688214388611993e-95 351
srn_3390_Teg799.48193101720242172043411933e-95 351
srn_0290_sRNA1795.8321690780597827412169e-95 350
srn_1230_sRNA10899.471901049449849468711901e-93 346
srn_1080_RsaX0597.072056043759143779512051e-93 346
srn_2320_sRNA19597.52202321022076102227512024e-93 344
srn_2320_sRNA19591.437042775353775421861545e-1895.3
srn_1740_sRNA14798.961922071615071634111924e-93 344
srn_4860_sRNA39198.95190202574290257447911906e-92 340
srn_3960_sRNA323100.00184001927440192762311846e-92 340
srn_3960_sRNA323100.00184002191126219130911846e-92 340
srn_3960_sRNA323100.001840051787451805718416e-92 340
srn_3960_sRNA323100.001840047353447371718416e-92 340
srn_3960_sRNA32399.46184102079336207951911843e-90 335
srn_2060_sRNA179100.001840087462687480911846e-92 340
srn_4110_sRNA33597.47198502164653216485011982e-91 339
srn_1250_sRNA11099.461841050510850529111843e-90 335
srn_4740_sprA393.042301332527781252800932309e-90 333
srn_3330_Teg7198.41189301663760166394811899e-90 333
srn_1220_sRNA10799.451831049150049168211839e-90 333
srn_3060_sRNA24399.45182101475300147548131843e-89 331
srn_2520_Teg6093.36226521117074111729912162e-87 326
srn_2100_sRNA18198.901812090443790461711816e-87 324
srn_1640_rsaD99.441771066119466137011772e-86 322
srn_0540_sRNA34100.001740020657120674411742e-86 322
srn_4910_sRNA39598.34181302600628260080811813e-85 318
srn_2300_sRNA19399.431741099920399937611749e-85 316
srn_4400_sRNA35799.42172102328580232875111721e-83 313
srn_2950_Teg699.42172101364014136418511721e-83 313
srn_3310_sRNA263100.00168001659548165971511684e-83 311
srn_0430_sau5395.831928015363615382711924e-83 311
srn_3220_sRNA25496.28188701607716160790321892e-82 309
srn_3220_sRNA25493.5562402560032560646212e-1793.5
srn_1920_Teg9596.281887079816279834911882e-82 309
srn_0800_sRNA5598.841732032556432573631752e-82 309
srn_2410_Sau652498.27173301071455107162711737e-81 303
srn_3980_sRNA32498.80166202104147210431211661e-78 296
srn_3090_sRNA245100.00160001482900148305911601e-78 296
srn_3050_sRNA242100.00160001467506146766541631e-78 296
srn_0910_sRNA73100.001600038012338028211601e-78 296
srn_0080_Teg10795.1918790300163020211871e-78 296
srn_9500_sRNA36896.1118070242840624285851233024e-78 294
srn_4660_sRNA38096.13181412493341249352111782e-77 292
srn_4460_Teg2698.19166302379058237922311666e-77 291
srn_3480_sRNA27588.05251226175157717518201594086e-77 291
srn_3480_sRNA27584.982331961751373175159212302e-56 222
srn_3480_sRNA27589.66145113169523816953801613034e-44 182
srn_3480_sRNA27588.24136122100946810096022921602e-37 159
srn_3480_sRNA27591.3011581124419412443082721602e-36 156
srn_3480_sRNA27590.3511492110970911098211592714e-34 148
srn_3480_sRNA275100.0055005098665099201592133e-20 102
srn_3480_sRNA27598.1554103422123422651602135e-1895.3
srn_3480_sRNA27598.155410229157322916261602135e-1895.3
srn_3480_sRNA27594.925930231217823122361602182e-1793.5
srn_3480_sRNA27587.658191241489524149752042832e-1793.5
srn_3480_sRNA27587.6773817901967902682301591e-1484.2
srn_3480_sRNA27590.575350131882213188742131618e-1171.3
srn_2490_sRNA20697.09172501108898110906911726e-77 291
srn_2550_Teg8099.37159101138087113824511592e-76 289
srn_1070_Sau41100.001560043688843704311562e-76 289
srn_1280_sRNA11298.751602051403151419011603e-75 285
srn_0620_sRNA4098.751602023517623533511603e-75 285
srn_0580_Sau656997.591664022552322568811663e-75 285
srn_4630_sRNA37998.74159202487611248776911591e-74 283
srn_2330_Sau11100.00153001025233102538511531e-74 283
srn_4160_Sau2597.01167502191693219185911673e-74 281
srn_4160_Sau25100.001050047304647315010515e-48 195
srn_4160_Sau2597.30111212079903208001211118e-46 187
srn_4160_Sau2599.051050151738651749010418e-46 187
srn_4160_Sau2598.04102111928007192810711022e-42 176
srn_3540_sRNA28095.98174611786661178683311743e-74 281
srn_3540_sRNA28086.679010243814439012751864e-1999.0
srn_3540_sRNA28087.327163239332923933992641975e-1378.7
srn_2460_Teg5897.55163401102339110250111631e-73 279
srn_4030_sRNA329100.00150002148977214912611504e-73 278
srn_4020_sRNA32896.43168602145588214575511684e-73 278
srn_4120_Teg20100.00149002168096216824411492e-72 276
srn_1410_Teg77100.001490054610654625411492e-72 276
srn_3780_Teg13100.00148002006690200683711486e-72 274
srn_3430_sRNA27195.35172801728087172825811726e-72 274
srn_3040_Sau50100.00148001463528146367511486e-72 274
srn_1330_sRNA11893.961825252426352444411767e-71 270
srn_1330_sRNA11898.461302047839747852611301e-58 230
srn_1330_sRNA11895.454420100392710039701281718e-1171.3
srn_2910_Teg63100.00145001344676134482011453e-70 268
srn_2660_sRNA21999.32148101231186123133311483e-70 268
srn_2580_Teg103100.00145001155407115555111453e-70 268
srn_2290_sbrA99.321481098226498241111483e-70 268
srn_1550_Teg4996.881605063393463409311603e-70 268
srn_1010_sRNA8992.1519113241909041927911903e-70 268
srn_5100_sRNA41097.42155402725556272571011553e-69 265
srn_1510_rsaA100.001430060112060126211433e-69 265
srn_1140_Sau82100.001430047165347179511433e-69 265
srn_3340_Teg7298.65148201674270167441711481e-68 263
srn_2200_Sau605399.311451096264996279311451e-68 263
srn_4970_sRNA39899.31144102637209263735211445e-68 261
srn_3560_sRNA28398.00150301792518179266711505e-68 261
srn_3550_Teg7599.31145011790247179039011455e-68 261
srn_4670_RsaOT98.63146202496915249706011462e-67 259
srn_2070_Sau685198.641471188676988691511462e-67 259
srn_0350_sRNA2097.371524011785911801031542e-67 259
srn_4560_sRNA37295.62160702444618244477711606e-67 257
srn_5110_sRNA41195.06162802733799273396011622e-66 255
srn_1100_Sau605498.621450145291945306311432e-66 255
srn_0510_rsaG100.001370019914519928111378e-66 254
srn_3610_SprC98.59142201833069183321011423e-65 252
srn_0500_sRNA3097.931453019587019601411453e-65 252
srn_3080_Teg66100.00135001476546147668011351e-64 250
srn_0970_Sau1897.9014330413771413913471894e-64 248
srn_4320_sRNA35099.26136102293626229376111361e-63 246
srn_5040_sRNA40398.55138202670304267044111385e-63 244
srn_5090_sRNA40895.42153612717911271806311522e-62 243
srn_2080_Sau6851100.001310088713288726211312e-62 243
srn_3140_Teg15198.53136201508785150892011366e-62 241
srn_4590_Teg28100.00128002465761246588811288e-61 237
srn_2340_Sau59100.00128001026773102690011288e-61 237
srn_1540_Teg48100.001270063370063382611273e-60 235
srn_4070_sRNA33095.83144602156079215622211441e-59 233
srn_3740_Sau649298.47131201980175198030511314e-59 231
srn_3210_sRNA25493.08159711607612160777011551e-58 230
srn_1760_sRNA14999.211271072636572649111271e-58 230
srn_0020_sRNA190.701721608415858611721e-58 230
srn_2890_Sau7299.20125101340750134087411252e-57 226
srn_3150_Teg8399.19123101532007153212911232e-56 222
srn_1680_sRNA14298.411262068204968217411262e-56 222
srn_3840_sprG180.06326411931711231743030918e-56 220
srn_1910_rsaH97.661283079780079792711288e-56 220
srn_1520_Sau7699.181221060128060140111228e-56 220
srn_0590_sRNA3795.041415222857822871711408e-56 220
srn_4510_Teg25as100.00118002422513242263011183e-55 219
srn_2830_SbrB100.00118001302769130288611183e-55 219
srn_1380_Teg4698.391242054353554365811243e-55 219
srn_2030_Teg52100.001170083753483765011171e-54 217
srn_4130_Teg2199.16119102179983218010111194e-54 215
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srn_2000_Sau81100.0053008290568291081534e-1999.0
srn_1880_sRNA16098.2156107810137810681564e-1999.0
srn_9110_sRNA75100.0052003877353877861521e-1897.1
srn_4960_Sau6590100.005200263113226311831521e-1897.1
srn_3770_Teg122100.005200200661420066651521e-1897.1
srn_2940_sRNA23386.5289102438154390198101e-1897.1
srn_2940_sRNA23387.3271632393329239339988215e-1378.7
srn_2930_sRNA23386.5289102438154390198101e-1897.1
srn_2930_sRNA23387.3271632393329239339988215e-1378.7
srn_2920_Sau631898.185510135128813513421551e-1897.1
srn_2190_Sau651396.5558209577089577651581e-1897.1
srn_1930.1_rsaOF96.555820157379615738531581e-1897.1
srn_1020_sRNA90100.0052004259494260001521e-1897.1
srn_0560_Sau600992.5467502218602219261671e-1897.1
srn_0330_Sau652796.5558201055791056361581e-1897.1
srn_3230_Sau6936100.005100161224216122921515e-1895.3
srn_1060_Teg149100.0051004364234364731515e-1895.3
srn_4920_Sau3998.115310260402926040811532e-1793.5
srn_0960_Teg14798.1153104097464097984562e-1793.5
srn_0400_Sau2296.4356201470771471321562e-1793.5
srn_0250_Sau637298.11531044304443561532e-1793.5
srn_4870_Sau690998.085210257932025793711526e-1791.6
srn_2760_Sau8598.085210128349312835441526e-1791.6
srn_4380_Sau92100.004800231828823183351482e-1689.8
srn_2280_Sau675198.0451109821379821871512e-1689.8
srn_1500_Sau6667100.0048005947745948211482e-1689.8
srn_3760_Sau700998.005010200164520016941508e-1687.9
srn_3440_Sau6128100.004700173526217353081478e-1687.9
srn_1460_sRNA128100.0047005599475599931478e-1687.9
srn_5080_Sau6518100.004600271241227124571463e-1586.1
srn_3720_Teg121100.004600196598819660331463e-1586.1
srn_0480_Sau6717100.0045001887961888401451e-1484.2
srn_4310_Sau671597.874710229037622904221474e-1482.4
srn_1400_sRNA124100.0044005450225450651444e-1482.4
srn_4090_sprF392.865631849191849245107521e-1380.5
srn_0630_Sau6931100.0043002360842361261431e-1380.5
srn_9540_sRNA407100.004000270120327012421406e-1275.0
srn_4230_sRNA344100.004000223887522389141406e-1275.0
srn_4230_sRNA344100.004000223980222398411406e-1275.0
srn_1710_sRNA145100.0039007023817024191392e-1173.1
srn_2730_Teg10693.624730127901512790611478e-1171.3
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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