Staphylococcus pasteuri SP1

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.

Numbers of SRD’S predicted srn sequences =

subject_seq_id	identity	length	mismatch	gapopen	query_start	query_end	subject_start	subject_end	evalue	bitscore
tmRNA	92.22	360	26	2	1996710	1997068	1	359	5e-143	508
4.5S	95.14	247	10	2	1658610	1658855	1	246	6e-107	388
RNaseP	90.29	278	20	5	62466	62739	161	435	2e-97	357
srn_3910_RNAIII	80.73	467	44	31	541015	541459	1	443	6e-87	322
srn_4830_Sau6072	88.38	241	26	2	1092344	1092583	1	240	7e-77	289
srn_2130_rsaE	90.28	216	14	6	2165150	2165361	5	217	5e-73	276
srn_3320_sRNA264	85.83	240	25	9	271934	272166	1	238	4e-64	246
srn_2880_RsaOQ	80.29	350	49	20	2521538	2521877	9	348	4e-64	246
srn_0860_RsaOB	88.67	203	18	5	1562973	1563172	191	391	5e-63	243
srn_3040_Sau50	92.41	145	11	0	88102	88246	1	145	2e-52	207
srn_3050_sRNA242	88.89	162	18	0	92037	92198	1	162	3e-50	200
srn_3550_Teg75	91.67	144	7	4	398162	398305	7	145	1e-48	195
srn_1640_rsaD	90.07	151	11	3	1851671	1851819	26	174	5e-48	193
srn_4770_sRNA385	83.33	204	31	3	1068762	1068963	130	332	9e-46	185
srn_3950_Teg16	81.78	236	26	13	557989	558218	1	225	1e-44	182
srn_1210_sRNA106	86.79	159	20	1	1680119	1680276	1	159	5e-43	176
srn_4390_rsaOG	93.69	111	6	1	824849	824958	1	111	1e-39	165
srn_4160_Sau25	89.83	118	7	5	574520	574633	1	117	4e-34	147
srn_4160_Sau25	90.91	110	5	5	1706237	1706343	108	1	5e-33	143
srn_4160_Sau25	91.51	106	5	4	666436	666538	1	105	5e-33	143
srn_4160_Sau25	91.51	106	5	4	1662701	1662803	105	1	5e-33	143
srn_4160_Sau25	91.26	103	5	4	442343	442442	1	102	3e-31	137
srn_2330_Sau11	92.86	84	5	1	2237329	2237412	71	153	3e-26	121
srn_3020_Teg65	92.68	82	6	0	62509	62590	1	82	9e-26	119
srn_0930_Teg76	93.42	76	4	1	1600286	1600361	4	78	2e-23	111
srn_4220_sRNA345	96.72	61	2	0	744786	744846	27	87	9e-21	102
srn_4300_sRNA349	91.30	69	4	2	2131995	2132063	207	141	5e-18	93.5
srn_4300_sRNA349	91.30	69	4	2	2131689	2131757	207	141	5e-18	93.5
srn_4300_sRNA349	94.83	58	2	1	1752087	1752144	206	150	7e-17	89.8
srn_3190_Teg68	82.69	104	15	2	215408	215509	73	175	7e-17	89.8
srn_1460_sRNA128	100.00	47	0	0	1746769	1746815	1	47	3e-16	87.9
srn_3770_Teg122	97.87	47	0	1	512608	512653	4	50	4e-14	80.5